[trestles]

# Machine description
nickname        = trestles
name            = Trestles
location        = SDSC
description     = A large Linux cluster at SDSC
webpage         = http://www.sdsc.edu/us/resources/trestles/
status          = production

# Access to this machine
hostname        = trestles.sdsc.edu
#envsetup        = module purge && module load intel mvapich2 && source ~/.bashrc
aliaspattern    = ^trestles-login[12]\.sdsc\.edu$

# Source tree management
sourcebasedir   = /home/@USER@
disabled-thorns = <<EOT
EOT
enabled-thorns = <<EOT
EOT
optionlist      = trestles.cfg
submitscript    = trestles.sub
runscript       = trestles.run
make            = make -j12

# Simulation management
basedir         = /phase1/@USER@/simulations
cpu             = 4 x 8-core 2.4 GHz AMD Magny-Cours
cpufreq         = 2.4
flop/cycle      = 1  # ?
ppn             = 32
spn             = 4
mpn             = 1
max-num-threads = 32
num-threads     = 8
memory          = 65536
nodes           = 324
min-ppn         = 32
allocation      = TG-MCA02N014
queue           = normal
maxwalltime     = 48:00:00
submit          = qsub @SCRIPTFILE@
getstatus       = qstat -u @USER@ | awk '$1 == @JOB_ID@ {print $1,$5}'
stop            = qdel @JOB_ID@
submitpattern   = Your job (\d+) \(.*?\) has been submitted
statuspattern   = ^@JOB_ID@[ \t]
queuedpattern   = ^@JOB_ID@[ \t]+qw
runningpattern  = ^@JOB_ID@[ \t]+r
holdingpattern  = ^@JOB_ID@[ \t]+hqw
scratchdir      = scratchdir
exechost        = head -n 1 SIMFACTORY/NODES
exechostpattern = ^(\S+)
stdout          = cat @SIMULATION_NAME@.out
stderr          = cat @SIMULATION_NAME@.err
stdout-follow   = tail -n 100 -f @SIMULATION_NAME@.out @SIMULATION_NAME@.err