[queenbee] # Machine description nickname = queenbee name = Queen Bee location = LONI, LSU description = The large LONI Linux cluster webpage = http://www.loni.org/systems/system.php?system=QueenBee status = production # Access to this machine hostname = qb4.loni.org rsynccmd = /home/eschnett/rsync-3.0.6/bin/rsync sshcmd = ssh aliaspattern = ^qb([0-9]+)(\.loni\.org)?$ # Source tree management sourcebasedir = /home/@USER@ optionlist = queenbee-mvapich2.cfg submitscript = queenbee-mvapich2.sub runscript = queenbee-mvapich2.run make = make -j4 # Simulation management basedir = /scratch/@USER@/simulations # quota cpu = Quad Core Xeon 64-bit Processors cpufreq = 2.33 flop/cycle = 4 ppn = 8 spn = 2 mpn = 1 max-num-threads = 8 num-threads = 8 memory = 8192 nodes = 256 min-ppn = 8 allocation = loni_cactus06 queue = checkpt maxwalltime = 48:00:00 # maxqueueslots submit = qsub @SCRIPTFILE@ interactivecmd = qsub -I -X -l nodes=@NODES@:ppn=@PPN@ -l walltime=@WALLTIME@ -l cput=@WALLTIME@ # run # run2 getstatus = qstat @JOB_ID@ stop = qdel @JOB_ID@ submitpattern = (\d+)[.]qb2 statuspattern = ^@JOB_ID@[. ] queuedpattern = " Q " runningpattern = " R " holdingpattern = " H " scratchdir = /var/scratch/${USER}/${PBS_JOBID} exechost = qstat -f @JOB_ID@ exechostpattern = exec_host = (\w+)/ stdout = ssh @EXECHOST@ cat /var/spool/torque/spool/@JOB_ID@.qb2.OU stderr = ssh @EXECHOST@ cat /var/spool/torque/spool/@JOB_ID@.qb2.ER precmd = : postcmd = : stdout-follow = ssh @EXECHOST@ tail -n 100 -f /var/spool/torque/spool/@JOB_ID@.qb2.OU /var/spool/torque/spool/@JOB_ID@.qb2.ER