[queenbee] # Machine description nickname = queenbee name = Queen Bee location = LONI, LSU description = The large LONI Linux cluster webpage = http://www.loni.org/systems/system.php?system=QueenBee status = production # Access to this machine user = mwt email = mthomas@cct.lsu.edu hostname = qb4.loni.org # iomachine # trampoline rsynccmd = /home/eschnett/rsync-3.0.6/bin/rsync rsyncopts = sshcmd = ssh sshopts = localsshsetup = : environcmd = : sshsetup = : aliaspattern = ^qb[0-9](\.loni\.org)?$ # Source tree management sourcebasedir = /home/@USER@ optionlist = eric-mvapich2-new.cfg thornlist = wavetoy-generic.th submitscript = eric-mvapich2-new.sh make = make -j4 # Simulation management basedir = /scratch/@USER@/simulations # quota cpu = Quad Core Xeon 64-bit Processors cpufreq = 2.33 flop/cycle = 4 ppn = 8 spn = 2 mpn = 1 max-num-threads = 8 num-threads = 8 memory = 8192 nodes = 256 min-ppn = 8 allocation = loni_cactus05 queue = checkpt maxwalltime = 48:00:00 # maxqueueslots submit = qsub @SCRIPTFILE@ # run # run2 getstatus = qstat @JOB_ID@ stop = qdel @JOB_ID@ submitpattern = ([[:digit:]]+)[.]qb2 statuspattern = ^@JOB_ID@[. ] queuedpattern = " Q " runningpattern = " R " scratchdir = /var/scratch/${USER}/${PBS_JOBID} exechost = qstat -f @JOB_ID@ exechostpattern = exec_host = (\w+)/ stdout = ssh @EXECHOST@ cat /var/spool/torque/spool/@JOB_ID@.qb2.OU interactivecmd = qsub -I -l nodes=@NODES@:ppn=@PPN@ -l walltime=@WALLTIME@ -l cput=@WALLTIME@ mpirun = export MPICHDIR=/usr/local/packages/mvapich2/1.4/intel-11.1 && export MPI_NODEFILE=@MPI_NODEFILE@ && export CACTUS_STARTTIME=$(date +%s) && time ${MPICHDIR}/bin/mpirun_rsh -np @NUM_PROCS@ -hostfile ${MPI_NODEFILE} /bin/env MV2_ENABLE_AFFINITY=0 OMP_NUM_THREADS=@NUM_THREADS@ @EXECUTABLE@ -L 3 @PARFILE@ stderr = ssh @EXECHOST@ cat /var/spool/torque/spool/@JOB_ID@.qb2.ER precmd = : postcmd = : stdout-follow = ssh @EXECHOST@ tail -n 100 -f /var/spool/torque/spool/@JOB_ID@.qb2.OU /var/spool/torque/spool/@JOB_ID@.qb2.ER